Graph pangenome captures missing heritability and empowers tomato breeding

Zhou, Yao; Zhang, Zhiyang; Bao, Zhigui; Li, Hongbo; Lyu, Yaqing; Zan, Yanjun; Wu, Yaoyao; Cheng, Lin; Fang, Yuhan; Wu, Kun; Lyu, Hongjun; Huang, Sanwen; Zan, Yanjun; Zhang, Jinzhe; Zhang, Jinzhe; Lyu, Hongjun; Lin, Tao; Gao, Qiang; Saha, Surya; Mueller, Lukas; Fei, Zhangjun; Fei, Zhangjun; Stadler, Thomas; Stadler, Thomas; Xu, Shizhong; Zhang, Zhiwu; Speed, Doug; SCI

机构： Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Minist Agr & Rural Affairs,Shenzhen Branch, Genome Anal Lab,Guangdong Lab Lingnan Modern Agr, Shenzhen, Peoples R China; Swedish Univ Agr Sci, Umea Plant Sci Ctr, Dept Forestry Genet & Plant Physiol, Umea, Sweden; Chinese Acad Agr Sci, Minist Agr, Key Lab Biol & Genet Improvement Hort Crops, Sino Dutch Joint Lab Hort Genom, Beijing, Peoples R China; Chinese Acad Agr Sci, Inst Vegetables & Flowers, Beijing, Peoples R China; Shandong Acad Agr Sci, Inst Vegetables,Shandong Prov Key Lab Biol Greenh, Natl Improvement Ctr Vegetables,Minist Agr & Rura, Shandong Branch,Huang Huai Hai Reg Sci Observat &, Jinan, Peoples R China; China Agr Univ, Coll Hort, State Key Lab Agrobiotechnol, Beijing, Peoples R China; Boke Biotech, Wuxi, Jiangsu, Peoples R China; Cornell Univ, Boyce Thompson Inst, Ithaca, NY USA; ARS, USDA, Robert W Holley Ctr Agr & Hlth, Ithaca, NY USA; Swiss Fed Inst Technol, Inst Integrat Biol, Zurich, Switzerland; Swiss Fed Inst Technol, Basel Plant Sci Ctr, Zurich, Switzerland; Univ Calif Riverside, Dept Bot & Plant Sci, Riverside, CA 92521 USA; Washington State Univ, Dept Crop & Soil Sci, Pullman, WA 99164 USA; Aarhus Univ, Quantitat Genet & Genom QGG, Aarhus, Denmark;

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Identification of QTLs for Seed Dormancy in Cultivated Peanut Using a Recombinant Inbred Line Mapping Population

Wang, Ming Li; Tonnis, Brandon; Tallury, Shyam; Wang, Hui; Guo, Baozhu; Wang, Hui; Zhao, Chuanzhi; Zhao, Chuanzhi; Wang, Xingjun; Clevenger, Josh; SCI

机构： USDA ARS, Plant Genet Resources Conservat Unit, 1109 Expt St, Griffin, GA 30223 USA; USDA ARS, Crop Genet & Breeding Res Unit, Tifton, GA 31793 USA; Univ Georgia, Dept Plant Pathol, Tifton, GA 31793 USA; Shandong Acad Agr Sci, Biotechnol Res Ctr, Jinan 250100, Peoples R China; Hudson Alpha Inst Biotechnol, Ctr Plant Genom & Sustainable Agr, Huntsville, AL 35802 USA;

关键词： A; hypogaea; Seed dormancy; Aflatoxin contamination; Quantitative trait loci; Marker-assisted selection

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High-Density Genetic Variation Map Reveals Key Candidate Loci and Genes Associated With Important Agronomic Traits in Peanut

Zhao, Huiling; Tian, Ruizheng; Xia, Han; Li, Changsheng; Li, Guanghui; Li, Aiqin; Zhang, Xianying; Zhou, Ximeng; Ma, Jing; Huang, Huailing; Zhang, Kun; Thudi, Mahendar; Wang, Xingjun; Zhao, Chuanzhi; Zhao, Huiling; Xia, Han; Zhou, Ximeng; Ma, Jing; Huang, Huailing; Ma, Changle; Wang, Xingjun; Zhao, Chuanzhi; Zhang, Kun; Thudi, Mahendar; SCI

机构： Shandong Acad Agr Sci, Inst Biotechnol, Inst Crop Germplasm Resources, Shandong Prov Key Lab Crop Genet Improvement Ecol, Jinan, Peoples R China; Shandong Normal Univ, Coll Life Sci, Jinan, Peoples R China; Shandong Agr & Engn Univ, Coll Agr Sci & Technol, Jinan, Peoples R China; Rajendra Prasad Cent Agr Univ, Samsthipur, India;

关键词： peanut; GWAS; SNP array; molecular markers; agronomic traits

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Pyrolysis temperature regulates sludge-derived biochar production, phosphate adsorption and phosphate retention in soil

Liang, Jinsong; Ye, Junpei; Shi, Chuan; Zhang, Panyue; Zubair, Mohammad; Chang, Jianning; Zhang, Lian; Liang, Jinsong; Zhang, Panyue; Chang, Jianning; Zhang, Lian; Ye, Junpei; Shi, Chuan; Guo, Jianbin; Zubair, Mohammad; SCI

机构： Beijing Forestry Univ, Coll Environm Sci & Engn, Beijing Key Lab Source Control Technol Water Poll, Beijing 100083, Peoples R China; Beijing Forestry Univ, Coll Environm Sci & Engn, Engn Res Ctr Water Pollut Source Control & Ecorem, Beijing 100083, Peoples R China; Henan Normal Univ, Sch Environement, Xinxiang 453007, Henan, Peoples R China; Beijing Forestry Univ, Sch Soil & Water Conservat, Beijing 100083, Peoples R China; Shandong Acad Agr Sci, Inst Anim Sci & Vet Med, Jinan 250100, Peoples R China;

关键词： Sewage sludge-derived biochar; Pyrolysis temperature; Phosphate; Metal oxide; Exchangeable Mg; Phosphate retention

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De novo assembly provides new insights into the evolution of Elaeagnus angustifolia L.

Mao, Yunfei; Cui, Xueli; Wang, Haiyan; Qin, Xin; Liu, Yangbo; Yin, Yijun; Su, Xiafei; Hu, Yanli; Wang, Wenli; Wei, Shaochong; Chen, Xiaoliu; Mao, Zhiquan; Chen, Xuesen; Shen, Xiang; Tang, Juan; Wang, Fengling; Ma, Fengwang; Duan, Naibin; Zhang, Donglin; SCI

机构： Shandong Agr Univ, Coll Hort Sci & Engn, State Key Lab Crop Biol, Tai An, Shandong, Peoples R China; Biomarker Technol Corp, Beijing, Peoples R China; Northwest Agr & Forestry Univ, Coll Hort, Yangling, Shaanxi, Peoples R China; Shandong Acad Agr Sci, Germplasm Resource Ctr Shandong Prov, Jinan, Peoples R China; Univ Georgia, Dept Hort, Athens, GA 30602 USA;

关键词： Elaeagnus angustifolia L; Genome; Evolutionary response mechanism; Desertification-affected land

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Effects of ploidy variation on DNA methylation and gene expression in Pear (Pyrus communis L.)

Liu, Jianlong; Zhou, Fengli; Cui, Shaoqiang; Yang, Yingjie; Li, DingLi; Zhang, Shaoling; Wang, Ran; Zhang, Shaoling; Sun, Qingrong; Guan, Qiuzhu; SCI

机构： Qingdao Agr Univ, Coll Hort, Qingdao Key Lab Genet Improvement & Breeding Hort, Qingdao, Peoples R China; Nanjing Agr Univ, Coll Hort, Nanjing 210095, Peoples R China; Shandong Acad Agr Sci, ShanDong Inst Pomol, Tai An 271000, Shandong, Peoples R China;

关键词： Pear; Polyploid; DNA methylation; MSAP; qRT-PCR

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Companion Animals as Potential Reservoirs of Antibiotic Resistant Diarrheagenic Escherichia coli in Shandong, China

Cui, Lulu; Li, Ruibo; Han, Yu; Hao, Guijuan; Sun, Shuhong; Zhao, Xiaonan; Wang, Guisheng; SCI

机构： Shandong Agr Univ, Coll Anim Sci & Vet Med, Shandong Prov Key Lab Anim Biotechnol & Dis Contr, Tai An 271018, Shandong, Peoples R China; Shandong Acad Agr Sci, Inst Anim Sci & Vet Med, Jinan 250100, Peoples R China; Shandong Anim Dis Prevent & Control Ctr, Jinan 250100, Peoples R China;

关键词： antimicrobial resistance; Escherichia coli; ESBLs; phenotype; companion animals; diarrheagenic

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Effects of continuous straw return and fertilization on rice lodging resistance

Zhao, Qinglei; Xin, Caiyun; Liu, Qihua; Jiang, Xu; Yang, Jun; Ma, Hui; SCI

机构： Shandong Acad Agr Sci, Inst Wetland Agr & Ecol, Jinan 250100, Peoples R China;

关键词： Lodging index; Oryza sativa; returning straw to the field; rice; rice-wheat rotation; Triticum aestivum

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ILDR1 promotes influenza A virus replication through binding to PLSCR1

Liu, Yueyue; Lin, Shuqian; Xie, Yunhui; Zhao, Lu; Yang, Shifa; Yin, Bin; Li, Guiming; Zhao, Zengcheng; Huang, Zhongli; Wu, Jiaqiang; Liu, Yueyue; Du, Haibo; Xu, Zhigang; Xu, Zhigang; Wu, Jiaqiang; SCI

机构： Shandong Acad Agr Sci, Inst Poultry Sci, Shandong Prov Anim & Poultry Green Hlth Prod Crea, Jinan 250100, Shandong, Peoples R China; Shandong Univ, Sch Life Sci, Shandong Prov Key Lab Anim Cells & Dev Biol, Qingdao 266237, Shandong, Peoples R China; Shandong Normal Univ, Shandong Prov Collaborat Innovat Ctr Cell Biol, Jinan 250014, Shandong, Peoples R China; Shandong Normal Univ, Coll Life Sci, Key Lab Anim Resistant Biol Shandong, Jinan 250014, Shandong, Peoples R China;

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Effects of xanthan gum and sodium alginate on gelatinization and gels structure of debranched pea starch by pullulanase

Wang, Kun; Gao, Wei; Yu, Bin; Yuan, Chao; Guo, Li; Cui, Bo; El-Aty, A. M. Abd; Wang, Kun; Gao, Wei; Yu, Bin; Yuan, Chao; Guo, Li; Sui, Jie; El-Aty, A. M. Abd; El-Aty, A. M. Abd; Cui, Bo; El-Aty, A. M. Abd; SCI

机构： Qilu Univ Technol, Shandong Acad Sci, State Key Lab Biobased Mat & Green Papermaking, Jinan 250353, Peoples R China; Qilu Univ Technol, Shandong Acad Sci, Sch Food Sci & Engn, Jinan 250353, Shandong, Peoples R China; Shandong Acad Agr Sci, Jinan 250131, Shandong, Peoples R China; Cairo Univ, Fac Vet Med, Dept Pharmacol, Giza 12211, Egypt; Ataturk Univ, Med Fac, Dept Med Pharmacol, Erzurum, Turkey; Qilu Univ Technol, Shandong Acad Sci, Daxue Rd, Jinan 250353, Shandong, Peoples R China;

关键词： Debranched pea starch; Xanthan gum; Sodium alginate; Pasting; Rheology; In vitro digestion

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