Genome-Wide Identification and Analysis of the VQ Motif-Containing Protein Family in Chinese Cabbage (Brassica rapa L. ssp Pekinensis)
文献类型： 外文期刊
作者： Zhang, Gaoyuan 1 ; Wang, Fengde 2 ; Li, Jingjuan 2 ; Ding, Qian 2 ; Zhang, Yihui 2 ; Li, Huayin 2 ; Zhang, Jiannong 1 ; Gao, Jianwei 3 ;
作者机构： 1.Gansu Agr Univ, Coll Hort, Lanzhou 730070, Peoples R China
2.Shandong Acad Agr Sci, Inst Vegetables & Flowers, Shandong Key Lab Greenhouse Vegetable Biol, Natl Vegetable Improvement Ctr,Shandong Branch, Jinan 250100, Peoples R China
3.Shandong Acad Agr Sci, Inst Vegetables
关键词： VQ motif-containing proteins; Chinese cabbage; expression patterns
期刊名称：INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES （ 影响因子：5.923； 五年影响因子：6.132 ）
ISSN： 1422-0067
年卷期： 2015 年 16 卷 12 期
页码：
收录情况： SCI
摘要： Previous studies have showed that the VQ motif-containing proteins in Arabidopsis thaliana and Oryza sativa play an important role in plant growth, development, and stress responses. However, little is known about the functions of the VQ genes in Brassica rapa (Chinese cabbage). In this study, we performed genome-wide identification, characterization, and expression analysis of the VQ genes in Chinese cabbage, especially under adverse environment. We identified 57 VQ genes and classified them into seven subgroups (I-VII), which were dispersedly distributed on chromosomes 1 to 10. The expansion of these genes mainly contributed to segmental and tandem duplication. Fifty-four VQ genes contained no introns and 50 VQ proteins were less than 300 amino acids in length. Quantitative real-time PCR showed that the VQ genes were differentially expressed in various tissues and during different abiotic stresses and plant hormone treatments. This study provides a comprehensive overview of Chinese cabbage VQ genes and will benefit the molecular breeding for resistance to stresses and disease, as well as further studies on the biological functions of the VQ proteins.
- 相关文献
作者其他论文 更多>>
-
BrMYB116 transcription factor enhances Cd stress tolerance by activating FIT3 in yeast and Chinese cabbage
作者：Anwar, Ali;Yuan, Chao;Cui, Bing;Wang, Lixia;He, Lilong;Gao, Jianwei;Anwar, Ali;Yuan, Chao;Yuan, Chao
关键词：Chinese cabbage; abiotic stress; BrMYB116; FIT3; Cd stress; RNA-seq
-
Genome-Wide Identification, Expression Analysis and Functional Study of DELLA Genes in Chinese Cabbage (Brassica rapa L. ssp. pekinensis)
作者：Yuan, Yongxue;Wang, Lixia;Liu, Chenwen;Fu, Xin;Li, Xiaolong;Qiu, Minghui;Li, Jingjuan;Zhang, Yihui;Li, Cheng;Wang, Fengde;Gao, Jianwei;Yuan, Yongxue;Qiu, Nianwei;Zhao, Qianyu;Liu, Chenwen;Qiu, Minghui
关键词：Brassica rapa; DELLA protein; evolution; stress tolerance; growth and development
-
PHB3 interacts with BRI1 and BAK1 to mediate brassinosteroid signal transduction in Arabidopsis and tomato
作者：Li, Cheng;Zhang, Shan;Li, Jingjuan;Wang, Fengde;Gao, Jianwei;Li, Cheng;Zhang, Shan;Huang, Shuhua;Zhao, Tong;Lv, Siqi;Liu, Jianwei;Wang, Shufen;Wang, Xiaofeng;Zhang, Shan;Huang, Shuhua;Zhang, Yanfeng;Liu, Xiaohui;He, Shen;Xiao, Fangming
关键词：Arabidopsis; brassinosteroid; BRASSINOSTEROID-INSENSITIVE 1; BRI1 ASSOCIATED RECEPTOR KINASE 1; phosphorylation; PROHIBITIN 3; tomato
-
The Roles of Gibberellins in Regulating Leaf Development
作者：Ritonga, Faujiah Nurhasanah;Zhou, Dandan;Zhang, Yihui;Li, Cheng;Li, Jingjuan;Gao, Jianwei;Ritonga, Faujiah Nurhasanah;Zhou, Dandan;Song, Runxian
关键词：bioactive; biosynthesis; crosstalk; metabolism; phytohormones
-
Integrative analysis of physiology, biochemistry and transcriptome reveals the mechanism of leaf size formation in Chinese cabbage (Brassica rapa L. ssp. pekinensis)
作者：Wang, Lixia;Zhang, Shu;Li, Jingjuan;Zhang, Yihui;Zhou, Dandan;Li, Cheng;He, Lilong;Li, Huayin;Wang, Fengde;Gao, Jianwei;Zhang, Ye;Zhou, Dandan
关键词：leaf size; cell cycle; cyclins; MYB transcription factor; Chinese cabbage
-
BrCYP71A15 Negatively Regulates Hg Stress Tolerance by Modulating Cell Wall Biosynthesis in Yeast
作者：Anwar, Ali;Zhang, Shu;Wang, Lixia;He, Lilong;Gao, Jianwei
关键词：Chinese cabbage; Hg stress; GFP; yeast; cell wall; gene expression
-
Genome-Wide Identification of the NRT1 Family Members and Their Expression under Low-Nitrate Conditions in Chinese Cabbage (Brassica rapa L. ssp. pekinensis)
作者：Zhang, Yihui;Ritonga, Faujiah Nurhasanah;Zhang, Shu;Wang, Fengde;Li, Jingjuan;Gao, Jianwei;Ritonga, Faujiah Nurhasanah
关键词：NRT1; Chinese cabbage; gene structure; genotype; nitrogen
