您好,欢迎访问山东省农业科学院文献资源数据库平台

鸡microRNA基因“seed”区4个SNPs的群体遗传分布

文献类型: 中文期刊

作者: 耿立英 1 ; 张传生 2 ; 尹春光 3 ; 曹顶国 4 ; 付志新 2 ;

作者机构: 1.河北科技师范学院

2.河北科技师范学院动物科学系

3.济宁学院生命科学与工程系

4.河北科技师范学院济宁学院山东省农业科学院家禽研究所

关键词: 鸡;MicroRNA;seed;单核苷酸多态;遗传变异

期刊名称: 天津农业科学

ISSN: 1006-6500

年卷期: 2011 年 17 卷 01 期

页码: 100-105

摘要: 采用CRS-RFLP技术研究了rs14076349、rs16681032、rs14934924和rs16681031共4个SNPs位点在蛋肉兼用型、蛋用型和药用观赏型3种经济类型的6个鸡群的遗传多样性。结果表明:rs16681032在所有鸡群中未检测到变异,rs16681031、rs14934924和rs14076349位点具有较高的次等位基因频率,分别为0.4553、0.1173和0.3296。兼用型鸡与药用观赏型鸡在rs16681031位点的基因频率分布差异显著(P<0.05);兼用型鸡与蛋用型鸡在rs14934924位点的基因频率分布差异极显著(P<0.01);rs14076349位点在所有经济类群间的基因频率分布差异极显著(P<0.01)。根据基因频率信息进行聚类分析,大致可将6个鸡群分为3类,聚类结果反映出不同鸡种microRNAs调控通路的差异。研究结果表明,鸡种系特异性microRNA基因可能受到正选择的影响而存在加速进化现象,其"seed"区SNPs位点在不同鸡种的经济表型的形成中可能发挥着重要作用。

  • 相关文献

[1]鸡mir-1644基因“seed”区的T>C多态分析. 耿立英,张传生,尹春光,曹顶国,杜立新,陈娟. 2011

[2]山东地方鸡种Mx基因遗传变异与免疫性状的关系. 李福伟,雷秋霞,曹项国,韩海霞,周艳. 2012

[3]基于重测序的大豆新品种齐黄34的全基因组变异挖掘. 张彦威,李伟,张礼凤,王彩洁,戴海英,徐冉. 2016

[4]中国荷斯坦牛HSF1基因microRNA SNPs与耐热性能的相关性研究. 李秋玲,鞠志花,贾祥捷,黄金明,李建斌,李荣岭,李芳,王长法,仲跻峰. 2011

[5]奶牛OLR1 3'UTR A223C多态的生物学信息分析. 张传生,耿立英,尹春光,曹顶国,刘铮铸,付志新. 2011

[6]4条小麦保守MicroRNAs的表达谱分析及其靶基因预测. 闫妍,韩冉,赵惠贤. 2012

[7]miRBase-microRNA序列数据库. 高青,鞠志花,王长法,李国荣. 2011

[8]奶牛OLR1 3′UTR A223C多态的生物学信息分析(英文). 张传生,耿立英,尹春光,曹顶国,刘铮铸,付志新. 2010

[9]High-throughput sequencing discovery of conserved and novel microRNAs in Chinese cabbage (Brassica rapa L. ssp pekinensis). Wang, Fengde,Li, Libin,Liu, Lifeng,Li, Huayin,Zhang, Yihui,Gao, Jianwei,Yao, Yingyin,Ni, Zhongfu. 2012

[10]Genome-wide identification of microRNAs and their targets in wild type and phyB mutant provides a key link between microRNAs and the phyB-mediated light signaling pathway in rice. Sun, Wei,wu, Xiu,Xie, Xianzhi,Xu, Xiao Hui,Lu, Xingbo,Sun, Hongwei,Wang, Yong. 2015

[11]Identification of Splice Variants, Targeted MicroRNAs and Functional Single Nucleotide Polymorphisms of the BOLA-DQA2 Gene in Dairy Cattle. Hou, Qinlei,Huang, Jinming,Ju, Zhihua,Li, Qiuling,Li, Liming,Wang, Changfa,Sun, Tao,Wang, Lingling,Hou, Minghai,Zhong, Jifeng,Hang, Suqin.

[12]Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein Cattle. Huang, Jinming,Ju, Zhihua,Li, Qiuling,Hou, Qinlei,Wang, Changfa,Li, Jianbin,Li, Rongling,Wang, Lingling,Sun, Tao,Hang, Suqin,Gao, Yundong,Hou, Minghai,Zhong, Jifeng.

[13]Virus-Based MicroRNA Silencing and Overexpressing in Common Wheat (Triticum aestivum L.). Jian, Chao,Chi, Qing,Wang, Shijuan,Ma, Meng,Liu, Xiangli,Zhao, Huixian,Han, Ran,Zhao, Huixian. 2017

[14]A comprehensive microRNA expression profile of the backfat tissue from castrated and intact full-sib pair male pigs. Bai, Ying,Huang, Jin-Ming,Liu, Gang,Zhang, Ji-Bin,Liu, Cheng-Kun,Fang, Mei-Ying,Huang, Jin-Ming,Wang, Jian-Ying. 2014

[15]microRNA/microRNA* complementarity is important for the regulation pattern of NFYA5 by miR169 under dehydration shock in Arabidopsis. Du, Qingguo,Gao, Wei,Sun, Suzhen,Li, Wen-Xue,Zhao, Meng. 2017

[16]MicroRNA expression analysis of rosette and folding leaves in Chinese cabbage using high-throughput Solexa sequencing. Wang, Fengde,Li, Huayin,Zhang, Yihui,Li, Jingjuan,Li, Libin,Liu, Lifeng,Wang, Lihua,Wang, Cuihua,Gao, Jianwei.

[17]Response of microRNAs to cold treatment in the young spikes of common wheat. Song, Guoqi,Zhang, Rongzhi,Zhang, Shujuan,Li, Yulian,Gao, Jie,Han, Xiaodong,Chen, Mingli,Wang, Jiao,Li, Wei,Li, Genying,Song, Guoqi,Zhang, Rongzhi,Zhang, Shujuan,Li, Yulian,Gao, Jie,Han, Xiaodong,Chen, Mingli,Wang, Jiao,Li, Wei,Li, Genying,Song, Guoqi,Zhang, Rongzhi,Zhang, Shujuan,Li, Yulian,Gao, Jie,Han, Xiaodong,Chen, Mingli,Wang, Jiao,Li, Wei,Li, Genying. 2017

[18]Mining, identification and function analysis of microRNAs and target genes in peanut (Arachis hypogaea L.). Zhang, Tingting,Hu, Shuhao,Yan, Caixia,Li, Chunjuan,Zhao, Xiaobo,Shan, Shihua,Hu, Shuhao,Wan, Shubo.

[19]拷贝数变异的研究方法及其在畜禽中的研究进展. 王继英,郭建凤,张大龙,王彦平,陶海英,武英. 2013

[20]中国水禽新城疫病毒F和HN基因的变异趋势. 徐怀英,秦卓明,王友令,欧阳文军,谭雷涛,何叶峰,金维江,袁小远. 2009

作者其他论文 更多>>