Screening of Bovine Tissue-Specific Expressed Genes and Identification of Genetic Variation Within an Adipose Tissue-Specific lncRNA Gene
文献类型： 外文期刊
作者： Zhang, Sihuan 1 ; Xu, Han 2 ; Jiang, Enhui 1 ; Akhatayeva, Zhanerke 1 ; Jiang, Fugui 3 ; Song, Enliang 3 ; Pan, Chuanying 1 ; Chen, Hong 1 ; Lan, Xianyong 1 ;
作者机构： 1.Northwest A&F Univ, Coll Anim Sci & Technol, Xianyang, Peoples R China
2.Sun Yat Sen Univ, Sch Med, Guangzhou, Peoples R China
3.Shandong Acad Agr Sci, Inst Anim Sci & Vet, Jinan, Peoples R China
关键词： cattle; transcriptome; adipogenesis; adipose tissue-specific genes; insertion; deletion
期刊名称：FRONTIERS IN VETERINARY SCIENCE （ 影响因子：3.471； 五年影响因子：3.821 ）
ISSN：
年卷期： 2022 年 9 卷
页码：
收录情况： SCI
摘要： Global classification of bovine genes is important for studies of biology and tissue-specific gene editing. Herein, we classified the tissue-specific expressed genes and uncovered an important variation in the promoter region of an adipose tissue-specific lncRNA gene. Statistical analysis demonstrated that the number of genes specifically expressed in the brain was the highest, while it was lowest in the adipose tissues. A total of 1,575 genes were found to be significantly higher expressed in adipose tissues. Bioinformatic analysis and qRT-PCR were used to uncover the expression profiles of the 23 adipose tissue-specific and highly expressed genes in 8 tissues. The results showed that most of the 23 genes have higher expression level in adipose tissue. Besides, we detected a 12 bp insertion/deletion (indel) variation (rs720343880) in the promoter region of an adipose tissue-specific lncRNA gene (LOC100847835). The different genotypes of this variation were associated with carcass traits of cattle. Therefore, the outcomes of the present study can be used as a starting point to explore the development of cattle organs and tissues, as well as to improve the quality of cattle products.
- 相关文献
作者其他论文 更多>>
-
Investigation of oxygen packaging to maintain beef color stability and microbiology safety after periods of long-term superchilled storage
作者：Yang, Jun;Chen, Xue;Duan, Xinxin;Sun, Ge;Luo, Xin;Hopkins, David L.;Zhang, Yimin;Yang, Jun;Sun, Ge;Luo, Xin;Zhang, Yimin;Chen, Xue;Li, Ke;Cheng, Haijian;Song, Enliang;Holman, Benjamin W. B.
关键词：Long -term storage; Retail display period; Superchilled storage; Modified atmosphere packaging; Beef color; Microbiota abundance
-
Are two beneficial mutations (p.Q249R and 90-bp Indel) within the ovine BMPRIB gene associated with growth traits?
作者：Xu, Hongwei;Akhmet, Nazar;Luo, Yunyun;Pan, Chuanying;Akhatayeva, Zhanerke;Lan, Xianyong;Guo, Zhenggang;Song, Enliang;Malmakov, Nurlan;Akhatayeva, Zhanerke
关键词：sheep; FecB (BMPRIB); polymorphism; growth traits; MAS
-
Formic acid enhances whole-plant mulberry silage fermentation by boosting lactic acid production and inhibiting harmful bacteria
作者：Hao, Lihong;Jiang, Fugui;Wang, Yanping;Wang, Huaizhong;Hu, Hongmei;You, Wei;Hu, Xin;Cheng, Haijian;Wang, Cheng;Song, Enliang;Hao, Lihong;Jiang, Fugui;Wang, Yanping;Wang, Huaizhong;Hu, Hongmei;You, Wei;Hu, Xin;Cheng, Haijian;Wang, Cheng;Song, Enliang;Song, Enliang
关键词：mulberry; silage; glucose; formic acid; lactic acid bacteria; salts; bacterial community
-
MicroRNA sequence variation can impact interactions with target mRNA in cattle
作者：Hao, Dan;Thomsen, Bo;Holm, Lars-Erik;Hao, Dan;Yang, Yu;Chen, Hong;Wang, Xiao;Wang, Xiao
关键词：Cattle; MicroRNA; Single -nucleotide polymorphism; Quantitative trait locus
-
Effect of Dietary Supplementation of Astragaloside IV on Growth performance, Inflammatory, and Antioxidant Status of Holstein Male Calves
作者：Wang, Yafang;Song, Enliang;Wang, Yafang;Jiang, Fugui;Cheng, Haijian;Liu, Yifan;Wei, Chen;Liu, Ce;Song, Enliang;Wang, Yafang;Jiang, Fugui;Cheng, Haijian;Liu, Yifan;Wei, Chen;Liu, Ce;Song, Enliang
关键词：Astragaloside IV; Growth performance; Antioxidant; Inflammatory; Holstein calves
-
Insertion/Deletion (InDel) Variants within the Sheep Fat-Deposition-Related PDGFD Gene Strongly Affect Morphological Traits
作者：Luo, Yunyun;Zhang, Mengyang;Guo, Zhengang;Wijayanti, Dwi;Lan, Xianyong;Guo, Zhengang;Xu, Hongwei;Jiang, Fugui
关键词：sheep; PDGFD gene; insertion/deletion (InDel); morphological traits; association
-
The ovine HIAT1 gene: mRNA expression, InDel mutations, and growth trait associations
作者：Luo, Yunyun;Akhatayeva, Zhanerke;Mao, Cui;Lan, Xianyong;Mao, Cui;Jiang, Fugui;Guo, Zhengang;Xu, Hongwei
关键词：sheep; HIAT1 gene; insertion; deletion (InDel); growth traits; marker-assisted selection (MAS)
