文献类型: 外文期刊
作者: Zhong, Ruichun 1 ; Zhou, Meili 2 ; Zhao, Chuanzhi 3 ; Hou, Lei 3 ; Li, Changsheng 3 ; Wang, Xingjun 3 ; Tang, Ronghua; 1 ;
作者机构: 1.Guangxi Acad Agr Sci, Cash Crop Res Inst, Nanning 530007, Peoples R China
2.Nankai Univ, Coll Life Sci, Tianjin 300071, Peoples R China
3.Shandong Acad Agr Sci, Shandong Prov Key Lab Crop Genet Improvement Ecol, Biotech Res Ctr, Jinan 250100, Peoples R China
4.Shandong Univ, Coll Agr, Jinan 250100, Peoples R China
关键词: peanut;simple sequence repeat marker;transcriptome;gynophore
期刊名称:PLANT BREEDING ( 影响因子:1.832; 五年影响因子:1.956 )
ISSN:
年卷期:
页码:
收录情况: SCI
摘要: Peanut is one of the most important oil crops in the world. To accelerate the marker-assisted selection programmes of peanut, a transcriptome library of peanut gynophores at three different growth stages was constructed and sequenced using Illumina HiSeq 2000. Totally, 72527 unigenes were assembled and mined for EST SSRs. A total of 5058 SSRs were obtained by using the SSR finding programme, which represented an average density of one SSR per 5.65kb. Four thousand four hundred and forty-two unigenes that contained one or more SSRs were identified. The most abundant SSRs in peanut are trinucleotides (55.1%) SSRs and followed by dinucleotides (33.2%). AG/CT (25.8%) repeats were the most abundant and followed by AAG/CTT (19.9%). Primers for 200 SSRs were designed for PCR amplification and for analysis of polymorphism in 22 peanut cultivars. Polymorphism could be detected by 17 SSRs among these cultivars. The newly developed SSR markers from peanut gynophore transcriptome sequencing will be an additional source of markers to the peanut community.
- 相关文献
作者其他论文 更多>>
-
The uS10c-BPG2 module mediates ribosomal RNA processing in chloroplast nucleoids
作者:Sun, Xueping;Wang, Jingwen;Zhao, Chuanzhi;Wang, Xingjun;Li, Pengcheng;Sun, Xueping;Wang, Jingwen;Zhao, Chuanzhi;Wang, Xingjun;Li, Pengcheng;Sun, Xueping;Wang, Jingwen;Singla-Rastogi, Meenu;Li, Pengcheng
关键词:
-
Nitrogen application in pod zone improves yield and quality of two peanut cultivars by modulating nitrogen accumulation and metabolism
作者:Li, Guanghui;Guo, Xin;Hou, Lei;Wang, Guanghao;Tian, Ruizheng;Wang, Xingjun;Zhao, Chuanzhi;Sun, Wei;Qu, Chunjuan
关键词:Peanut; Pod zone nitrogen application; Yield; Enzymatic activity; Gene expression
-
Transcriptome profiling of MYB-overexpressed transgenic lines provides crucial molecular insights into anthocyanin and remodel the biosynthesis regulatory network in Nicotiana tabacum
作者:Raziq, Abdul;Zhang, Kun;Ahmad, Naveed;Zhao, Huiling;Zhao, Shuzhen;Pan, Jiaowen;Li, Aiqin;Wang, Xingjun;Zhao, Chuanzhi;Raziq, Abdul;Ahmed, Shabeer;Raziq, Abdul;Ahmed, Shabeer;Sun, Wei;Ahmad, Naveed;Raza, Muhammad Ali;Din, Atta Mohi Ud;Wang, Xingjun;Zhao, Chuanzhi
关键词:Transcriptome; Differentially expressed genes; Anthocyanin biosynthesis; MYB genes; Abiotic stress; Nicotiana tabacum
-
High-density bin-based genetic map reveals a 530-kb chromosome segment derived from wild peanut contributing to late leaf spot resistance
作者:Pan, Jiaowen;Li, Xiaojie;Yu, Conghui;Wang, Guanghao;Tian, Ruizheng;Li, Changsheng;Xia, Han;Zhao, Shuzhen;Hou, Lei;Zi, Hailing;Wang, Xingjun;Zhao, Chuanzhi;Pan, Jiaowen;Li, Xiaojie;Yu, Conghui;Tian, Ruizheng;Xia, Han;Zhao, Shuzhen;Hou, Lei;Wang, Xingjun;Zhao, Chuanzhi;Fu, Chun;Song, Xiaofeng;Wang, Zhenyu;Gao, Meng;Bian, Jianxin;Liu, Xiaoqin;Bertioli, David;Leal-Bertioli, Soraya;Pandey, Manish K.
关键词:
-
Phylogenomic Analysis of Cytochrome P450 Gene Superfamily and Their Association with Flavonoids Biosynthesis in Peanut (Arachis hypogaea L.)
作者:Zhang, Kun;Qin, Yongmei;Zhao, Jin;Yang, Xiangli;Zhang, Kun;Zhao, Shuzhen;Li, Changsheng;Pan, Jiaowen;Wang, Guanghao;Zhao, Chuanzhi;Sun, Wei;Shi, Hourui;He, Liangqiong;Han, Zhuqiang
关键词:A. hypogaea; cytochrome P450; expression pattern; flavonoid biosynthesis pathway
-
Genome-wide identification and expression analysis of GA20ox and GA3ox genes during pod development in peanut
作者:Sun, Jie;Zhang, Xiaoqian;Zhao, Chuanzhi;Hou, Lei;Pan, Jiaowen;Wang, Xingjun;Zhao, Shuzhen;Sun, Jie;Hou, Lei;Pan, Jiaowen;Wang, Xingjun;Zhao, Shuzhen;Sun, Jie;Zhang, Xiaoqian;Wang, Xingjun;Zhao, Shuzhen;Fu, Chun;Ahmad, Naveed;Naeem, Muhammad
关键词:Arachis hypogaea; Gibberellin biosynthesis; Gene expression analysis; Pod development
-
Transcriptional networks orchestrating red and pink testa color in peanut
作者:Ahmad, Naveed;Zhang, Kun;Ma, Jing;Zhao, Shuzhen;Pan, Jiaowen;Li, Changsheng;Wang, Xingjun;Li, Aiqin;Zhao, Chuanzhi;Ahmad, Naveed;Zhang, Kun;Ma, Jing;Zhao, Shuzhen;Pan, Jiaowen;Li, Changsheng;Wang, Xingjun;Li, Aiqin;Zhao, Chuanzhi;Ahmad, Naveed;Zhang, Kun;Ma, Jing;Ma, Changle;Wang, Xingjun;Zhao, Chuanzhi;Yuan, Mei;Wang, Mingqing;Deng, Li;Ren, Li;Gangurde, Sunil S.;Guo, Baozhu;Gangurde, Sunil S.;Guo, Baozhu
关键词:Peanut; Testa color; Anthocyanin biosynthesis; flavonoids; Bulk RNA-seq (BR-seq); Transcription factors



