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The complete chloroplast genome of Castanea seguinii, an endemic to China

文献类型: 外文期刊

作者: Chen, Xin 1 ; Liu, Qingzhong 1 ; Guo, Wei 2 ; Xu, Li 1 ; Zhang, Lisi 1 ;

作者机构: 1.Shandong Acad Agr Sci, Shandong Inst Pomol, Shandong Prov Key Lab Fruit Tree Biotechnol Breed, Tai An 271000, Shandong, Peoples R China

2.Taishan Acad Forestry Sci, Tai An 271000, Shandong, Peoples R China

关键词: Castanea seguinii; chloroplast genome; Illumina sequencing

期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.658; 五年影响因子:0.674 )

ISSN: 2380-2359

年卷期: 2019 年 4 卷 1 期

页码:

收录情况: SCI

摘要: Castanea seguinii is an endemic chestnut species in China, which is widely distributed over central and southeastern China. The chloroplast genome sequences were finally resolved by high-throughput sequencing platform Illumina Hiseq X Ten. Totally the genome is 160,419 by in size, AT rich (63.3%), comprising a couple of 25,694 bp long inverted repeat regions, separated by a 90,055 bp large and 18,976 by small single copy regions. 79 protein-coding genes, four ribosomal RNA genes and 30 transfer RNA genes were identified and annotated. The results of the molecular phylogenetic analysis exhibited that C. seguinii showed the closest relationship with C. mollissima, with high bootstrap support.

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