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The complete chloroplast genome sequence of Vitis pseudoreticulata

文献类型: 外文期刊

作者: Ma, Chao 1 ; Fu, Peining 1 ; Wang, Lei 1 ; Zhao, Liping 1 ; Xu, Wenping 1 ; Zhang, Caixi 1 ; Wang, Shiping 1 ; Lu, Jiang; 1 ;

作者机构: 1.Shanghai Jiao Tong Univ, Sch Agr & Biol, Dept Plant Sci, Shanghai, Peoples R China

2.Shanghai Jiao Tong Univ, Ctr Viticulture & Enol, Sch Agr & Biol, Shanghai 200240, Peoples R China

3.Shandong Acad Agr Sci, Key Lab Agroprod Proc Technol Shandong, Inst Agrofood Sci & Technol, Jinan, Shandong, Peoples R China

关键词: Vitis pseudoreticulata; chloroplast genome; Illumina sequencing; phylogenetic analysis

期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.658; 五年影响因子:0.674 )

ISSN:

年卷期: 2019 年 4 卷 2 期

页码:

收录情况: SCI

摘要: Vitis pseudoreticulata is a wild Vitis species distributed in Southern China and wildly used to crossbreeding based on its resistance to moisture. In this study, the complete chloroplast genome of V. pseudoreticulata was assembled for the first time. The chloroplast genome was 161,065?bp in length, including two single-copy regions (19,083 and 89,276), which separated by a pair of inverted repeat regions. In totally, 132 genes were predicted, including 87 CDSs, 8 rRNA genes and 37 tRNA genes. The phylogenetic tree analysis showed that V. pseudoreticulata was the closest related to Vitis amurensis.

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