Identification of potential key genes affecting soybean growth under salt stress via transcriptome study
文献类型： 外文期刊
作者： Li, N. 1 ; Li, Z. 2 ; Fan, S. 2 ; Pu, Y. 1 ; Gong, Y. 1 ; Tian, R. 1 ; Guo, X. 2 ; Ding, H. 1 ;
作者机构： 1.Shandong Ctr Crop Germplasm Resources, Sci Res Off, Jinan 250100, Shandong, Peoples R China
2.Shandong Normal Univ, Coll Life Sci, Jinan 250014, Shandong, Peoples R China
关键词： differentially expressed genes; Glycine max; RNA-seq; WGCNA
期刊名称：BIOLOGIA PLANTARUM （ 影响因子：1.747； 五年影响因子：2.146 ）
ISSN： 0006-3134
年卷期： 2020 年 64 卷
页码：
收录情况： SCI
摘要： Soybean is one of the most important economic crops in the world. However, the salinization of soil results in the decrease of soybean yield as it is only a moderately salt-tolerant crop. We treated three soybean cultivars with low and high concentrations of NaCl. The differentially expressed genes between the control group and the salt treatment group were identified by mRNA sequencing and analyzed by gene ontology and Kyoto encyclopedia of genes and genomes annotations. We performed weighted gene co-expression network analysis on all samples and found genes most related to the phenotype. After verifying the results of differentially expressed genes by quantitative PCR, we finally identified Glyma06G01990, Glyma08G22730, Glyma019G05140, and Glyma06G20160 as key genes affecting the soybean growth under salt stress.
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